Determinação de clorobenzenos em água por cromatografia de fase gasosa com headspace

As preocupações com o meio ambiente em particular com a água, adquirem especial importância, porque as demandas estão se tornando cada vez maiores, sob o aspecto crescente da população e das atividades industriais. Quando se fala em água subterrânea, a primeira ideia que surge é que ela seja potável. Mas nem sempre isso é uma verdade. Em área urbana, os crescentes números de problemas devido a contaminação, na maioria das vezes por vazamentos de combustíveis oriundos dos tanques de armazenamento dos postos de gasolina. Sem falar nas indústrias que também oferecem potencial risco de contaminação para esses corpos hídricos e são pouco divulgadas. O presente trabalho tem como foco determinar os compostos clorobenzenos por cromatografia de fase gasosa com headspace (CG-HS) em matriz água e validar a metodologia. A metodologia usada neste estudo foi cromatografia de fase gasosa com headspace (CG HS), por ser uma técnica excelente e sensível e é utilizada para determinar compostos voláteis em baixas concentrações. Os dados obtidos foram tratados estatisticamente de modo avaliar a seletividade, os limites de detecção e quantificação, a faixa linear de trabalho, a linearidade e a recuperação. As recuperações variam de 80 a 110%, os coeficientes de variação obtidos foram menor que 20%, todas as substâncias estudadas apresentaram linearidade na faixa de trabalho de 0,8 a 100g.L-1. Foram estudadas 10 amostras de água subterrânea do Município do Rio de Janeiro e nas amostras analisadas foram encontrados todos os compostos em estudo, com faixa de concentração: monoclorobenzeno (<0,8 a 2,988g.L-1); 1,3-diclorobenzeno (<0,8 a 23,067g.L-1); 1,4-diclorobenzeno (nd a 16,160g.L-1); 1,2-diclorobenzeno (<0,8 a 48,685g.L-1); 1,3,5-triclorobenzeno (<0,8 a 21,900g.L-1); 1,2,4-triclorobenzeno (1,007 a 183,808g.L-1) e 1,2,3-triclorobenzeno (<0,8 a 126,886g.L-1)

Caracterização físico-quimica da glicerina proveniente de usinas de biodiesel e determinação de metanol residual por CG com amostragem por headspace estático

Pós-graduação em Química - IQ

Mus Hs 750/5 - Adagio

[Carl Oestreich]

Kinetics of interaction of Cotton Leaf Curl Kokhran Virus-Dabawali (CLCuKV-Dab) coat protein and its mutants with ssDNA

Gemini viral assembly and transport of viral DNA into nucleus for replication, ssentially involve DNA-coat protein interactions. The kinetics of interaction of Cotton LeafCtirl Kokhran Virus-Dabawali recombinant coat protein (rCP) with DNA was studied by electrophoretic mobility shift assay (EMSA) and Surface plasmon resonance (SPR). The rCP interacted with ssDNA with a K-A, of 2.6 +/- 0.29 x 10(8) M-1 in a sequence non-specific manner. The CP has a conserved C2H2 type zinc finger motif composed of residues C68, C72, H81 and H85. Mutation of these residues to alanine resulted in reduced binding to DNA probes. The H85A mutant rCP showed the least binding with approximately 756 fold loss in the association rate and a three order magnitude decrease in the binding affinity as compared to rCP. The CP-DNA interactions via the zinc finger motif could play a Crucial role ill Virus assembly and in nuclear transport. (C) 2009 Elsevier Inc.

Sequence specificity in spermine-induced structural changes in CG-oligomers

The role of spermine in inducing A-DNA conformation in deoxyoligonucleotides has been studied using CCGG and GGCC as model sequences. It has been found that while CCGG adopts an alternating B-DNA conformation in low salt solution at low temperature, addition of spermine to this medium induces a B --greater than A transition. In contrast, the A-DNA-like structure of GGCC in low salt solution at low temperature does not change under the influence of spermine. This suggests a sequence-dependent behaviour of spermine. Further these results suggest that the A-DNA conformation observed in the crystals of d(iCCGG) and d(GGCC)2 might have been due to the presence of spermine in the crystallization cocktail.

Interruptions of (CG)n sequences by GG, TG and CA need not prevent B to Z transition in solution

Oligonucleotides containing alternating purines-pyrimidines with AT base pairs have been shown to exist in the Z-form preferably in solid state. We report that oligodeoxyribonucleotides with GG, TG and CA interruptions in their alternating CG sequences can undergo B to Z transition in solution in the absence of any chemical modification or topological constraint. The sequences, d(CGCGCGGCGCGC) and d(CGTGCGCACG) have been synthesised and shown to adopt Z- conformation in presence of millimolar concentrations of Ni2+ under low water activity conditions. Significance of GG, TG and CA interruptions in the B to Z transition is discussed.

Development of an LH receptor assay capable of measuring serum LH/CG in a wide variety of species

The development of a radioreceptor assay (RRA) that can measure serum LH in a variety of species and CG in sera and urine of pregnant women and monkeys is reported. Using sheep luteal membrane as the receptor source and I-125-labelled hLH/hCG as the tracer, dose-response (displacement) curves were obtained using hLH or hCG as standard. The addition of LH-free serum (200 mul per tube) had no affect on the standard displacement curve. The assay is simple, requires less than 90 min to complete and provides reproducible results. The sensitivity of the assay was 0.6 ng hLH per tube and the intra- and interassay variations were 9.6 and 9.8, respectively. Sera obtained from male and female bonnet monkeys (Macaca radiata) and monkey pituitary extract showed parallelism to the standard curve. The concentrations of LH measured correlated with the physiological status of the animals. Sera of rats, rabbits, hamsters, guinea-pigs, sheep and humans showed parallelism to the hLH standard curve indicating the viability of the RRA to measure serum LH of different species. Since the receptors recognize LH and CG, detection of pregnancy in monkeys and women was possible using this assay. The sensitivity of the assay for hCG was 8.7 miu per tube. This RRA could be a convenient alternative to the Leydig cell bioassay for obtaining the LH bioactivity profile of sera and biological fluids.

Biochemical characterization of C4 protein of cotton leaf curl Kokhran virus-Dabawali

Background: Cotton leaf curl Kokhran Virus-Dabawali (CLCuKV-Dab) is a monopartite begomovirus encoding two proteins V1 and V2 in the virion sense and four proteins Cl, C2, C3 and C4 in the complementary sense. The C4 protein of monopartite begomoviruses has been implicated to play a role in symptom determination and virus movement. The present work aims at the biochemical characterization of this protein. Methods: The C4 protein of CLCuKV-Dab was purified in fusion with GST and tested for the ability to hydrolyze ATP and other phosphate containing compounds. ATPase activity was assayed by using radiolabeled gamma-32P]-ATP and separating the product of reaction by thin layer chromatography. The hydrolysis of other compounds was monitored by the formation of a blue colored phosphomolybdate complex which was estimated by measuring the absorbance at 655 nm. Results: The purified GST-C4 protein exhibited metal ion dependent ATPase and inorganic pyrophosphatase activities. Deletion of a sequence resembling the catalytic motif present in phosphotyrosine phosphatases resulted in 70% reduction in both the activities. Mutational analysis suggested arginine 13 to be catalytically important for the ATPase and cysteine 8 for the pyrophosphatase activity of GST-C4. Interaction of V2 with GST-C4 resulted in an increase in both the enzymatic activities of GST-C4. Conclusions: The residues important for the enzymatic activities of GST-C4 are present in a motif different from the classical Walker motifs and the non-classical ATP binding motifs reported so far. General significance: The C4 protein of CLCuKV-Dab, a putative natively unfolded protein, exhibits enzymatic activities.

Evaluacion de la produccion de chilote en el cultivo de maiz (Zea mays L.) variedad HS-5G utilizando sustratos mejorados y determinacion de los coeficientes "Kc" y "Ky", bajo riego, Finca Las Mercedes, Managua 2009

El presente trabajo de investigación se estableció el 20 de Abril al 16 Junio del 2009, en la Unidad Productiva Hacienda Las Mercedes propiedad de la Universidad Nacional Agraria, ubicada en el municipio de Managua Departamento de Managua km 11 carretera Norte, entrada al carnic 2 km al lago, teniendo su ubicación geográfica en las siguientes coordenadas: 12°10’14” a 12°08’05” de latitud Norte y 86°10’22” a 86°09’44” longitud Oeste, a 56 msnm. La temperatura promedio es de 32.7°C, con una precipitación de 1400-1450 mm anuales, humedad relativa de 72% y una velocidad máxima del viento de 25.2Km/h. El propósito del experimento fue Evaluar la producción de chilote en el cultivo de maíz (Zea mays, L. ) variedad HS-5G, con los diferentes tratamientos Compost, Bocashi, Biofertilizante, Químico (Urea 46%) y la obtención de los coeficientes de cultivos “Kc” y el rendimiento “Ky”, bajo el sistema de riego por aspersión en la finca Hacienda Las Mercedes. Las dosis utilizadas fueron calculadas a parti r de los requerimientos del cultivo y un análisis de suelo realizado previo a la siembra, se aplicaron las dosis de 17,857 kg.h-1 de compost, 10,521 kg.h-1 de Bocashi 26,450 gal.h-1 de Biofertilizante todos estos abonos orgánicos fueron elaborados como parte de la investigación haciendo uso de los distintos materiales que se tienen en la finca para su composición, el fertilizante mineral con 214 kg.h- 1 urea 46%. El ensayo se estableció en un diseño de bloque completo al azar (BCA) con cuatro tratamientos y cuatro repeticiones. La dimensión Total del ensayo es de 585m2 (26m x 22.5m), cada parcela era de 14m2 (4m x 3.5m) 1.5 m2 para la parcela útil. La distancia entre bloque fue de 2 m y de 1.5 m entre parcela. Las variables cuantitativas evaluadas fueron Altura de la planta, Número de hojas, Diámetro del tallo y en los componentes del rendimiento: Altura del chilote, Peso con braquia, Peso sin braquia, Longitud del chilote, Diámetro del chilote y Rendimiento por tratamiento. A los datos obtenidos se les sometió a un análisis de varianza (ANDEVA) y separación de medias mediante el uso de la prueba de Diferencias Mínimas Signi ficativas (LSD α=0.05). Utilizando Software estadístico Infostat. Los resultados muestran que la única variable que presentó diferencias significativas fue la altura de planta a los 8 días después de siembra encontrándose alturas mayor de 5.99 cm cuando el cultivo fue fertilizado con Bocashi ya que el bocashi retiene mayor humedad. Serealizo un análisis económico, logrando un beneficio neto de C$517,165 el fertilizante sintético urea 46% obtuvo una tasa de retorno marginal (37.93 %). Con respecto a las variables de riego, tomando en cuenta las etapas fonológicas del cultivo se le aplico mayor volumen de agua en la fase de emergencia y crecimiento vegetativo para todos los tratamientos se obtuvo un coeficiente decultivo uniforme y un coeficiente de rendimiento por lo que el químico fue el que obtuvo una menor pérdida con respecto a los otros tratamientos.

MILU-CG method and the numerical study on the flow around a rotating circular cylinder

A hybrid finite difference method and vortex method (HDV), which is based on domain decomposition and proposed by the authors (1992), is improved by using a modified incomplete LU decomposition conjugate gradient method (MILU-CG), and a high order implicit difference algorithm. The flow around a rotating circular cylinder at Reynolds number R-e = 1000, 200 and the angular to rectilinear speed ratio alpha is an element of (0.5, 3.25) is studied numerically. The long-time full developed features about the variations of the vortex patterns in the wake, and drag, lift forces on the cylinder are given. The calculated streamline contours agreed well with the experimental visualized flow pictures. The existence of critical states and the vortex patterns at the states are given for the first time. The maximum lift to drag force ratio can be obtained nearby the critical states.

MILU-CG方法和绕旋转圆柱流动的数值研究

本文采用以修正的不完全ＬＵ分解作预处理器的共轭梯度法（ＭＩＬＵ＿ＣＧ），结合高阶隐式差分格式，改进了作者（１９９２）提出的基于区域分解、有限差分法与涡法杂交的数值方法（ＨＤＶ）·系统地研究了雷诺数Ｒｅ＝１０００，２００，旋转速度比α∈（０５，３２５）范围内，绕旋转圆柱从突然起动到充分发展，长时间内尾流旋涡结构和阻力、升力系数的变化规律·计算所得流线与实验流场显示相比，完全吻合·首次揭示了临界状态时的旋涡结构特性，并指出最佳升阻比就在该状态附近得到

Relação da apneia obstrutiva do sono com a função endotelial, estresse oxidativo, biomarcadores inflamatórios, perfil metabólico e atividade simpática em indivíduos obesos

Introdução: a apneia obstrutiva do sono (AOS) é considerada um fator de risco para as doenças cardiovasculares. Os mecanismos responsáveis pelo desenvolvimento da aterosclerose potencializados pela AOS não são completamente conhecidos. Entretanto, existem evidências de que a AOS está associada com aumento no estresse oxidativo, elevação nos mediadores inflamatórios, resistência à insulina, ativação do sistema nervoso simpático, elevação da pressão arterial (PA) e a disfunção endotelial. Objetivo: avaliar a relação da AOS com a função endotelial, o estresse oxidativo, os biomarcadores inflamatórios, o perfil metabólico, a adiposidade corporal, a atividade simpática e a PA em indivíduos obesos. Métodos: estudo transversal envolvendo 53 pacientes obesos, com índice de massa corporal (IMC) ≥ 30 e < 40 Kg/m2, sem distinção de raça e gênero, apresentando idade entre 20 e 55 anos. O estudo do sono foi realizado com o equipamento Watch-PAT 200, sendo feito o diagnóstico de AOS quando índice apneia-hipopneia (IAH) ≥ 5 eventos/h. Todos os participantes foram submetidos à avaliação do (a): adiposidade corporal (peso, % gordura corporal e circunferências da cintura, quadril e pescoço); PA; atividade do sistema nervoso simpático (concentrações plasmáticas de catecolaminas); biomarcadores inflamatórios (proteína C reativa ultrassensível (PCR-us) e adiponectina); estresse oxidativo (malondialdeído); metabolismo glicídico (glicose, insulina e HOMA-IR) e lipídico (colesterol total e frações e triglicerídeos); e função endotelial (índice de hiperemia reativa (RHI) avaliado com o equipamento Endo-PAT 2000 e moléculas de adesão celular). A análise estatística foi realizada com o software STATA versão 10. Resultados: dos 53 pacientes avaliados 20 foram alocados no grupo sem AOS (grupo controle; GC) (IAH: 2,550,35 eventos/h) e 33 no grupo com AOS (GAOS) (IAH: 20,163,57 eventos/h). A faixa etária (39,61,48 vs. 32,52,09 anos) e o percentual de participantes do gênero masculino (61% vs. 25%) foram significativamente maiores no GAOS do que no GC (p=0,01). O GAOS em comparação o GC apresentou valores significativamente mais elevados de circunferência do pescoço (CP) (40,980,63 vs. 38,650,75 cm; p=0,02), glicemia (92,541,97 vs. 80,21,92 mg/dL; p=0,0001), PA sistólica (126,051,61 vs.118,16 1,86 mmHg; p=0,003) e noradrenalina (0,160,02 vs. 0,120,03 ng/mL; p=0,02). Após ajustes para fatores de confundimento, a glicose e a PCR-us foram significativamente mais elevadas no GAOS. Os 2 grupos apresentaram valores semelhantes de IMC, insulina, HOMA-IR, perfil lipídico, adiponectina, PA diastólica, adrenalina, dopamina, moléculas de adesão celular e malondialdeído. A função endotelial avaliada pelo RHI também foi semelhante nos 2 grupos (GAOS:1,850,2 vs. GC:1,980,1; p=0,31). Nas análises de correlação, considerando todos os participantes do estudo, o IAH apresentou associação positiva e significativa com CP e PCR-us após ajustes para fatores de confundimento. A saturação mínima de O2 se associou de forma negativa e significativa com a CP, os níveis séricos de insulina e o HOMA-IR, mesmo após ajustes para fatores de confundimento. Conclusões: o presente estudo sugere que em obesos a AOS está associada com valores mais elevados de glicemia e inflamação; o aumento do IAH apresenta associação significativa com a obesidade central e com a inflamação; e a queda na saturação de oxigênio se associa com resistência à insulina.

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading.

Plants use siRNAs to target cytosine DNA methylation to both symmetrical CG and nonsymmetrical (CHG and CHH) sequence contexts. DNA methylation and siRNA clusters most frequently overlap with transposons in the Arabidopsis thaliana genome. However, a significant number of protein-coding genes also show promoter DNA methylation, and this can be used to silence their expression. Loss of the majority of non-CG DNA methylation in drm1 drm2 cmt3 triple mutants leads to developmental phenotypes. We identified the gene responsible for these phenotypes as SUPPRESSOR OF drm1 drm2 cmt3 (SDC), which encodes an F-box protein and possesses seven promoter tandem repeats. The SDC repeats show a unique silencing requirement for non-CG DNA methylation directed redundantly by histone methylation and siRNAs, and display spreading of siRNAs and methylation beyond the repeated region. In addition to revealing the complexity of DNA methylation control in A. thaliana, SDC has important implications for how plant genomes utilize gene silencing to repress endogenous genes.

RNAi, DRD1, and histone methylation actively target developmentally important Non-CG DNA methylation in Arabidopsis

Cytosine DNA methylation protects eukaryotic genomes by silencing transposons and harmful DNAs, but also regulates gene expression during normal development. Loss of CG methylation in the Arabidopsis thaliana met1 and ddm1 mutants causes varied and stochastic developmental defects that are often inherited independently of the original met1 or ddm1 mutation. Loss of non-CG methylation in plants with combined mutations in the DRM and CMT3 genes also causes a suite of developmental defects. We show here that the pleiotropic developmental defects of drm1 drm2 cmt3 triple mutant plants are fully recessive, and unlike phenotypes caused by met1 and ddm1, are not inherited independently of the drm and cmt3 mutations. Developmental phenotypes are also reversed when drm1 drm2 cmt3 plants are transformed with DRM2 or CMT3, implying that non-CG DNA methylation is efficiently re-established by sequence-specific signals. We provide evidence that these signals include RNA silencing though the 24-nucleotide short interfering RNA (siRNA) pathway as well as histone H3K9 methylation, both of which converge on the putative chromatin-remodeling protein DRD1. These signals act in at least three partially intersecting pathways that control the locus-specific patterning of non-CG methylation by the DRM2 and CMT3 methyltransferases. Our results suggest that non-CG DNA methylation that is inherited via a network of persistent targeting signals has been co-opted to regulate developmentally important genes. © 2006 Chan et al.